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__NOTOC__
__NOTOC__
<!--BANNER ACROSS TOP OF PAGE--><div id="ggw-topbanner" style="clear:both; position:relative; box-sizing:border-box; width:100%; margin:1.2em 0 6px; min-width:47em; border:1px solid #ddd; background-color:#f9f9f9; color:#000;"><div style="margin:0.4em; text-align:center;"><div style="font-size:160%; padding:.1em;">Welcome to [https://biomarkerkb.org/ BiomarkerKB] Wiki</div>'''<u>What is BiomarkerKB?</u>'''
<!--BANNER ACROSS TOP OF PAGE--><div id="ggw-topbanner" style="clear:both; position:relative; box-sizing:border-box; width:100%; margin:1.2em 0 6px; min-width:47em; border:1px solid #ddd; background-color:#f9f9f9; color:#000;"><div style="margin:0.4em; text-align:center;"><div style="font-size:160%; padding:.1em;">Welcome to [https://biomarkerkb.org/ BiomarkerKB] Wiki</div>
BiomarkerKB is a Common Fund Data Ecosystem (CFDE) sponsored project to develop a knowledgebase that will organize and integrate biomarker data from different public sources. The data will be connected to contextual information to show a novel systems-level view of biomarkers. The motivation for this project is to improve the harmonization and organization of biomarker data. This will be done by mapping biomarkers from public sources to, and across, CF data elements. This mapping will bridge knowledge across multiple Data Coordinating Centers (DCCs) and biomedical disciplines.
 
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'''<u>What is BiomarkerKB?</u>'''
[https://biomarkerkb.org/about/ BiomarkerKB] is a Common Fund Data Ecosystem (CFDE) sponsored project to develop a knowledgebase that is organized and integrates biomarker data from different public sources. The motivation for this project is to improve the harmonization and organization of biomarker data. This is being done by mapping biomarkers from public sources to, and across, Common Fund data elements. This mapping will bridge knowledge across multiple Data Coordinating Centers (DCCs) and biomedical disciplines..


'''<u>Our Mission:</u>'''
'''<u>Our Mission:</u>'''


Provide computational and informatics resources and tools for biomarker research.
*Provide computational and informatics resources and tools for biomarker research.


Integrate biomarker data and knowledge from diverse resources.
*Integrate biomarker data and knowledge from diverse resources.


'''<u>Our Goals:</u>'''
'''<u>Our Goals:</u>'''


Mapping biomarkers from public sources to relevant data elements.
*Mapping biomarkers from public sources to relevant data elements.


Mapping contextual data from participating CFDE DCCs.
*Mapping contextual data from participating CFDE DCCs.


Developing a framework for organizing biomarker data.
*Developing a framework for organizing biomarker data.


Creating tools for querying and exploring biomarker data.
*Creating tools for querying and exploring biomarker data.


Disseminating the results of this project to the research community.<div style="font-size:100%;"></div></div></div><div id="ggw_row2" style="display: flex; flex-flow: row wrap; justify-content: space-between; padding: 0; margin: 0 -5px 0 -5px;"><div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC; padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
*Disseminating the results of this project to the research community.
 
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         <h3>[[BiomarkerKB Portal|BiomarkerKB Portal]]</h3>
         <h3>[[BiomarkerKB Portal|BiomarkerKB Portal]]</h3>
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         <h3>[[Data Submission/Data Upload|Releases]]</h3>
         <h3>[[Releases]]</h3>
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&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Data Submission/Data Upload]]'' <br>
&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Releases]]'' <br>
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=== [[Biomarker About]] ===
=== [[Biomarker About]] ===
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&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Biomarker About]]'' <br>...
&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Biomarker About]]'' <br>
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=== [[BiomarkerKB Resource Integration]] ===
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&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[BiomarkerKB Resource Integration]]'' <br>
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=== [[Biomaker Ontology Working Group]] ===
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&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Biomaker Ontology Working Group]]'' <br>
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Latest revision as of 22:31, 8 December 2025

Welcome to BiomarkerKB Wiki

What is BiomarkerKB? BiomarkerKB is a Common Fund Data Ecosystem (CFDE) sponsored project to develop a knowledgebase that is organized and integrates biomarker data from different public sources. The motivation for this project is to improve the harmonization and organization of biomarker data. This is being done by mapping biomarkers from public sources to, and across, Common Fund data elements. This mapping will bridge knowledge across multiple Data Coordinating Centers (DCCs) and biomedical disciplines..

Our Mission:

  • Provide computational and informatics resources and tools for biomarker research.
  • Integrate biomarker data and knowledge from diverse resources.

Our Goals:

  • Mapping biomarkers from public sources to relevant data elements.
  • Mapping contextual data from participating CFDE DCCs.
  • Developing a framework for organizing biomarker data.
  • Creating tools for querying and exploring biomarker data.
  • Disseminating the results of this project to the research community.

BiomarkerKB Portal

    Main article: BiomarkerKB Portal
The BiomarkerKB portal is the web interface allowing browser based access to the Biomarker data...

Frequently Asked Questions

    Main article: Frequently Asked Questions
The FAQ section contains ...

Releases

    Main article: Releases

Biomarker About

    Main article: Biomarker About

Biomaker Ontology Working Group

    Main article: Biomaker Ontology Working Group

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