Main Page: Difference between revisions

Latest revision as of 22:31, 8 December 2025

What is BiomarkerKB? BiomarkerKB is a Common Fund Data Ecosystem (CFDE) sponsored project to develop a knowledgebase that is organized and integrates biomarker data from different public sources. The motivation for this project is to improve the harmonization and organization of biomarker data. This is being done by mapping biomarkers from public sources to, and across, Common Fund data elements. This mapping will bridge knowledge across multiple Data Coordinating Centers (DCCs) and biomedical disciplines..

Our Mission:

Provide computational and informatics resources and tools for biomarker research.

Integrate biomarker data and knowledge from diverse resources.

Our Goals:

Mapping biomarkers from public sources to relevant data elements.

Mapping contextual data from participating CFDE DCCs.

Developing a framework for organizing biomarker data.

Creating tools for querying and exploring biomarker data.

Disseminating the results of this project to the research community.

@@ Line 1: / Line 1: @@
 __NOTOC__
-<!--BANNER ACROSS TOP OF PAGE--><div id="ggw-topbanner" style="clear:both; position:relative; box-sizing:border-box; width:100%; margin:1.2em 0 6px; min-width:47em; border:1px solid #ddd; background-color:#f9f9f9; color:#000;"><div style="margin:0.4em; text-align:center;"><div style="font-size:160%; padding:.1em;">Welcome to [https://biomarkerkb.org/ BiomarkerKB] Wiki</div>'''<u>What is BiomarkerKB</u>'''
+<!--BANNER ACROSS TOP OF PAGE--><div id="ggw-topbanner" style="clear:both; position:relative; box-sizing:border-box; width:100%; margin:1.2em 0 6px; min-width:47em; border:1px solid #ddd; background-color:#f9f9f9; color:#000;"><div style="margin:0.4em; text-align:center;"><div style="font-size:160%; padding:.1em;">Welcome to [https://biomarkerkb.org/ BiomarkerKB] Wiki</div>
-BiomarkerKB is a Common Fund Data Ecosystem (CFDE) sponsored project to develop a knowledgebase that will organize and integrate biomarker data from different public sources. The data will be connected to contextual information to show a novel systems-level view of biomarkers. The motivation for this project is to improve the harmonization and organization of biomarker data. This will be done by mapping biomarkers from public sources to, and across, CF data elements. This mapping will bridge knowledge across multiple Data Coordinating Centers (DCCs) and biomedical disciplines.
+<div style="text-align:left;">
+'''<u>What is BiomarkerKB?</u>'''
+[https://biomarkerkb.org/about/ BiomarkerKB] is a Common Fund Data Ecosystem (CFDE) sponsored project to develop a knowledgebase that is organized and integrates biomarker data from different public sources. The motivation for this project is to improve the harmonization and organization of biomarker data. This is being done by mapping biomarkers from public sources to, and across, Common Fund data elements. This mapping will bridge knowledge across multiple Data Coordinating Centers (DCCs) and biomedical disciplines..
 '''<u>Our Mission:</u>'''
-Provide computational and informatics resources and tools for biomarker research.
+*Provide computational and informatics resources and tools for biomarker research.
-Integrate biomarker data and knowledge from diverse resources.
+*Integrate biomarker data and knowledge from diverse resources.
 '''<u>Our Goals:</u>'''
-Mapping biomarkers from public sources to relevant data elements.
+*Mapping biomarkers from public sources to relevant data elements.
+*Mapping contextual data from participating CFDE DCCs.
-Mapping contextual data from participating CFDE DCCs.
+*Developing a framework for organizing biomarker data.
-Developing a framework for organizing biomarker data.
+*Creating tools for querying and exploring biomarker data.
-Creating tools for querying and exploring biomarker data.
+*Disseminating the results of this project to the research community.
-Disseminating the results of this project to the research community.<div style="font-size:100%;"></div></div></div><div id="ggw_row2" style="display: flex; flex-flow: row wrap; justify-content: space-between; padding: 0; margin: 0 -5px 0 -5px;"><div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
+<div style="font-size:100%;"></div></div></div><div id="ggw_row2" style="display: flex; flex-flow: row wrap; justify-content: space-between; padding: 0; margin: 0 -5px 0 -5px;"><div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
-         <h3>[[BiomarkerKB portal|BiomarkerKB Portal]]</h3>
+         <h3>[[BiomarkerKB Portal|BiomarkerKB Portal]]</h3>
          <div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|BiomarkerKB portal}}
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[BiomarkerKB Portal]]'' <br>
 The [[BiomarkerKB portal]] is the web interface allowing browser based access to the Biomarker data...
          </div>
@@ Line 29: / Line 35: @@
          <h3>[[BiomarkerKB data repository|BiomarkerKB Data Repository]]</h3>
          <div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|BiomarkerKB data repository}}...
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[BiomarkerKB Data Repository]]'' <br>
 </div>
+    </div>
+<div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
+=== [[Frequently Asked Questions|BiomarkerKB Web Services API]] ===
+	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[BiomarkerKB Web Services API]]'' <br>
+        </div>
      </div>
 <div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
          <h3>[[Frequently Asked Questions]]</h3>
 	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|Frequently Asked Questions}}
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Frequently Asked Questions]]'' <br>
 The FAQ section contains ...
          </div>
      </div>
- <div id="ggw_row2" style="display: flex; flex-flow: row wrap; justify-content: space-between; padding: 0; margin: 0 -5px 0 -5px;"><div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
+<div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
-         <h3>[[BiomarkerKB Web Services API|BiomarkerKB Web Services API]]</h3>
+        <h3>[[Data Workflow & Data Model]]</h3>
-         <div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
+	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|BiomarkerKB Web Services API}}
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Data Workflow & Data Model]]'' <br>
-...
+        </div>
+    </div><div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
+        <h3>[[Data Submission/Data Upload]]</h3>
+	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Data Submission/Data Upload]]'' <br>
+        </div>
+    </div>
+<div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
+         <h3>[[Releases]]</h3>
+	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Releases]]'' <br>
+         </div>
+    </div>
+<div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
+=== [[Biomarker About]] ===
+	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Biomarker About]]'' <br>
+        </div>
+    </div>
+<div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
+=== [[BiomarkerKB Resource Integration]] ===
+	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[BiomarkerKB Resource Integration]]'' <br>
+        </div>
+    </div>
+ </div>
+    </div>
+<div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
+=== [[Biomaker Ontology Working Group]] ===
+	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
+&nbsp;&nbsp;&nbsp;&nbsp;'''''Main article:''' [[Biomaker Ontology Working Group]]'' <br>
          </div>
      </div>
+</div>
 </div>

Main Page: Difference between revisions

Latest revision as of 22:31, 8 December 2025

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