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Welcome to BiomarkerKB Wiki

What is BiomarkerKB?

BiomarkerKB is a Common Fund Data Ecosystem (CFDE) sponsored project to develop a knowledgebase that will organize and integrate biomarker data from different public sources. The data will be connected to contextual information to show a novel systems-level view of biomarkers. The motivation for this project is to improve the harmonization and organization of biomarker data. This will be done by mapping biomarkers from public sources to, and across, CF data elements. This mapping will bridge knowledge across multiple Data Coordinating Centers (DCCs) and biomedical disciplines.

Our Mission:

Provide computational and informatics resources and tools for biomarker research.

Integrate biomarker data and knowledge from diverse resources.

Our Goals:

Mapping biomarkers from public sources to relevant data elements.

Mapping contextual data from participating CFDE DCCs.

Developing a framework for organizing biomarker data.

Creating tools for querying and exploring biomarker data.

Disseminating the results of this project to the research community.

BiomarkerKB Portal

    Main article: BiomarkerKB Portal
The BiomarkerKB portal is the web interface allowing browser based access to the Biomarker data...

BiomarkerKB Data Repository

    Main article: BiomarkerKB Data Repository

BiomarkerKB Web Services API

    Main article: BiomarkerKB Web Services API

Frequently Asked Questions

    Main article: Frequently Asked Questions
The FAQ section contains ...

Data Workflow & Data Model

    Main article: Data Workflow & Data Model

Data Submission/Data Upload

    Main article: Data Submission/Data Upload

Releases

    Main article: Releases

Biomarker About

    Main article: Biomarker About