Data Release Notes

Versioning Format

The versioning format follows a three-digit structure: X.Y.Z.

• The first digit (X) changes annually, typically at the start of a new project year.
• The second digit (Y) increments with each new release.
• The third digit (Z) is updated for bug fixes or minor changes.
• For example, version 2.1.0 is expected to be released in August 2025.

Version 1.0.1

• Added xrefs.tsv to the list of datasets.
• Fixed ID formatting issues in NCBI and UniProt references within oncomx.tsv, removing erroneous spaces (e.g., NCBI: 3288 → NCBI:3288) and extraneous text (e.g., "(composition)"). Affected biomarkers included AN6295-1, AN6756-1, AN6728-1, and others.
• Merged assessed entity type synonyms.

Version 1.0.0

• BiomarkerKB data portal available with OncoMX, OpenTargets, MarkerDB, ClinVar, PubMed Central Biomarker Gene Set Curation, MW, UniProtKB, GWAS, CIViC biomarker data.