Data Release Notes

Versioning Format

The versioning format follows a three-digit structure: X.Y.Z. The first digit (X) changes annually, typically at the start of a new project year. The second digit (Y) increments with each new release. The third digit (Z) is updated for bug fixes or minor changes. For example, version 2.1.0 is expected to be released in August 2025.

Version 1.0.1

• Added xrefs.tsv to the list of datasets.
• Fixed ID formatting issues in NCBI and UniProt references within oncomx.tsv, removing erroneous spaces (e.g., NCBI: 3288 → NCBI:3288) and extraneous text (e.g., "(composition)"). Affected biomarkers included AN6295-1, AN6756-1, AN6728-1, and others.
• Merged assessed entity type synonyms.

Version 1.0.0

• BiomarkerKB data portal available with OncoMX, OpenTargets, MarkerDB, ClinVar, PubMed Central Biomarker Gene Set Curation, MW, UniProtKB, GWAS, CIViC biomarker data.